Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790901.1_cds_XP_016504360.1_1686
CDS Infomation

[gene=LOC107822343] [db_xref=GeneID:107822343] [protein=phospholipase A1-Igamma1, chloroplastic-like] [protein_id=XP_016504360.1] [location=15261..16778] [gbkey=CDS]
Sequence

ATGAAAGCAATCCACCACCTCCATGCCACCCATCTCCACCATCTTAGCCACCAATTACAC
AACAATAGACTTCCCATGGTCTATGCCTACAAAGATGTTTCAATTGAAACTCAAATAAAA
ACCTCAAAGAAATCAAATAGACTAGGTGAAACATTATCAAACCTTTTAAACATTCAAAAA
CCATACCAAAAGATCAATAATCCTAGTACTTATTCAAATTGGAACACTTTGAACATTGAA
GACAAGGCTAACACACCTACCATGTCCCCTAAAGAGGACATATCCGATCGATGGCGCGAC
ATTCATGGTGTTCAAGAGTGGGAAGGTCTTCTTGATCCACTCCATCCATTGCTTCGTCGA
GAAATTGTTAAATATGGCGAATTTGCTCAAGCAACTTATGATGCATTAGATTTCGACGCG
TTCTCAGAGTATTGTGGAAGTTGCATGTACAATAGTCATAAGTTGTTTGACAAGTTAGGC
CTTAGCAAAAGTGGCTATAAAGTTACCAAGTACATATATGCAATGTCACATATAGATATG
CCACAATGGCTTGAAAAATCAAGATTGACATACACATGGAGCAAAGATTCAAATTGGATT
GGTTTTGTTGCTGTGAGTGATGACGAAGAATCGCGAAGAATTGGGAGGAGAGACATTGTT
GTGGCATGGAGAGGGACAGTGACACCTTCAGAATGGTATGAAAATATGCAGAGGAAATTA
GAGCCAATTGGGCATATGGACTCAAAAGTGGAACATGGTTTTCTTAGTATTTACACATCT
AAGAGTGATTTAACTAGGTATAACAAGTCAAGTGCATCAGAACAAGTCATGAAAGAATTG
AAAATATTGGTAGATTATTATAAAAGCAAAGGTGAAGAAGTGAGCCTTACAATAACAGGA
CATAGCTTAGGGGGTGCACTAGCTCTCCTAAATGCTTATGAATCAGCAGCAAAATTTCCA
AGACTTCCAATTAGTGTTATTTCATTTGCAGCCCCAAGAGTTGGAAATATTGCATTTCGA
GATGAGATTTACCAGATGGGAATCAAAATTTTACGCGTTACAGTAAAACAAGATTTAGTA
CCTCGAATGCCCGGAATAGTTTTTAATGAAAGTTTACAAAAATTTGATGATTTTACAGGG
ACATTGGAGTGGATTTACACACATGTTGGAGCAGAATTGAAGCTTGATGTTAGGTCTTCA
CCTTACCTTAAAAGAGGATTTAATTTCATAGGGTTTCATATGCTTGAGACTTATCTTCAT
TTAGTAGATGGTTTTGTTAGTACAAGTTCAACTTTTAGGTCTAATGCTAAAAGGGATGTG
GCATTAGTAAATAAAGAATGTGATATGCTTGTAGATGAATTAAGAATTCCTACTTGTTGG
TATCAATTGGCCAACAAGGGGTTAGAGTGCAATTCTTATGGTAGGTGGGTAAGGCCCAAA
AGAGATCCAGAAGATATTCCTTCACCTACTAGAGAAGATTATAGTTATGGATTGCAAGAA
ATTAGTTATGAATTTTGA

Peptide Sequence

PEP ID

XP_016504360.1
PEP Infomation

PREDICTED: phospholipase A1-Igamma1, chloroplastic-like [Nicotiana tabacum]
Sequence

MKAIHHLHATHLHHLSHQLHNNRLPMVYAYKDVSIETQIKTSKKSNRLGETLSNLLNIQK
PYQKINNPSTYSNWNTLNIEDKANTPTMSPKEDISDRWRDIHGVQEWEGLLDPLHPLLRR
EIVKYGEFAQATYDALDFDAFSEYCGSCMYNSHKLFDKLGLSKSGYKVTKYIYAMSHIDM
PQWLEKSRLTYTWSKDSNWIGFVAVSDDEESRRIGRRDIVVAWRGTVTPSEWYENMQRKL
EPIGHMDSKVEHGFLSIYTSKSDLTRYNKSSASEQVMKELKILVDYYKSKGEEVSLTITG
HSLGGALALLNAYESAAKFPRLPISVISFAAPRVGNIAFRDEIYQMGIKILRVTVKQDLV
PRMPGIVFNESLQKFDDFTGTLEWIYTHVGAELKLDVRSSPYLKRGFNFIGFHMLETYLH
LVDGFVSTSSTFRSNAKRDVALVNKECDMLVDELRIPTCWYQLANKGLECNSYGRWVRPK
RDPEDIPSPTREDYSYGLQEISYEF

Transcript Sequence

Gene sequence data has not been registered.